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This wiki is for everything pertaining to the AJAX GBrowse project: info, discussion, development, documentation, feature requests, etc.
As this is a wiki, feel free to edit any part of it, especially the feature requests page.
The demo itself is at http://genome.biowiki.org/.
Please leave feedback on the general project info page.
Download
- The code is available using git like so:
git clone http://genome.biowiki.org/test/divbrowser/.git
- You can also download a working installation with sample data from D. melanogaster here.
Mailing lists
- gmod-ajax: Development discussion/announcements/etc. Sign up for this to receive the latest news and discussion
Recent new pages
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Topics in GBrowse web:
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Changed: now 13:28 GMT
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Changed by:
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BoscAjaxGbrowseAbstract2007
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28 Jun 2007 - 13:57 - r1.6
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TWikiGuest
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// Abstract: // AJAX GBrowse: Community Genome Annotation Made Easy // Mitch Skinner1, Andrew Uzilov1, Lincoln Stein2, Chris Mungall3, Ian Holmes1 // 1: Department of Bioengineering, University of California, Berkeley // 2: Cold Spring Harbor Laboratory // 3: Lawrence Berkeley National Laboratory // The current standard for genome browser software involves a user interface based on static web pages. These pages are created on a server from a pre-loaded database ...
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LivePageFiddling
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20 Apr 2007 - 16:44 - r1.5
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MitchSkinner
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// How I made the client components graphic for the AJAX-GBrowse RECOMB 2007 poster. // This is a transcript from the firebug javascript console: // tileDiv document.getElementById("3 mRNA tileDiv") // tileHighlight document.createElement("div"); // tileHighlight.style.cssText "background-color: rgb(56, 117, 215); position: absolute; left: 0 ; top: 0 ; width: 100 ; height: 100 ; opacity: 0.8; text-align: center; padding-top: 100px; font-size: 40pt;" // "background ...
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NameIdeas
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18 Apr 2007 - 21:00 - r1.5
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IanHolmes
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// Browser name ideas // Need a kick-ass name other than "AJAX GBrowse". // Perhaps we can pick a "development name" and save the final pick till when it's more fleshed out. // Suggestions: // Oxygene (er, the Jean-Michel Jarre tune Wikipedia:Oxygene? Also sounds a bit like doxygen) // Jaga // for aJAx Gbrowse // also in honor of one of the greatest jazz orchestras of all time, a Russian fairy tale, and some minor unrelated things // unfortunately clashes with ...
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Number of topics: 6
Recent changes
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Topics in GBrowse web:
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Changed: now 13:28 GMT
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Changed by:
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WebStatistics
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08 Sep 2008 - 01:56 - r1.330
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TWikiGuest
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// Statistics for Web // Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for topic save and uploads: // // Sep 2008 6635 37 1 1816 730 WebChanges 725 705 RecentRecent 493 356 SkinnerUzilovMungallHolmesRecomb2007Poster 185 175 WebRss 147 102 WebChangesGroup 78 TiledImagePanel 38 Main.IanHolmes // Aug 2008 17170 4 0 2425 2359 WebChanges 2353 1005 WebIndex 918 898 WebRss 635 441 InstallFeatureUpload 383 323 GettingStarted ...
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WebPreferences
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01 Sep 2008 - 17:00 - r1.38
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IanHolmes
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// Web Preferences // The following settings are web preferences of the web. These preferences overwrite the site-level preferences in ., and can be overwritten by user preferences (your personal topic, eg: .TWikiGuest in the web). // Preferences: // Set SKIN koala // Set NAVBARH // Set NAVBARF // Set NOWEBSBAR // Set WIKILOGOIMG /TWiki/TWikiLogos/BioWikiLogo.png // Set WIKILOGOURL http://biowiki.org/ // List of topics of the . web: //
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WebHome
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19 Aug 2008 - 17:05 - r1.108
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MitchSkinner
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// Welcome to the AJAX GBrowse wiki // This wiki is for everything pertaining to the AJAX GBrowse project: info, discussion, development, documentation, feature requests, etc. // As this is a wiki, feel free to edit any part of it, especially the feature requests page. // The demo itself is at http://genome.biowiki.org/. // Please leave feedback on the general project info page. // Download //
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Number of topics: 6
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