Bio Wiki

Welcome to biowiki.org. This site hosts wikis for various computational biology projects.

Right now you're in the Main web, used mostly as an online lab notebook by the Holmes lab at UC Berkeley. Anyone can edit almost any page, so please feel free to contribute content.

You may have come here for

• JBrowse, a genome browser;

• the DART package, a suite of tools for probabilistic sequence analysis, molecular evolutionary simulations and phylogenetic alignment;
  • programs include xrate, stemloc, Handel, Evol Deeds and more;

• one of our compbio classes at UC Berkeley.

Other webs hosted here include

• the Blog web, for sporadic postings of compbio links and literature refs;
• the TWiki web for documentation on how this site works;
• the Sandbox web to practice editing pages using this site's wiki syntax.